Updated 2026-02-16

Best Email Marketing Tools for HIPAA-Compliant SaaS

Email marketing that protects patient data. HIPAA-compliant platforms with BAAs, encrypted delivery, and healthcare-safe automation.

HIPAA-compliant SaaS operates under the strictest data regulations in the industry. If your product handles Protected Health Information (PHI), your email tool becomes a Business Associate that must sign a BAA and protect any PHI it processes. Most email marketing tools are not designed for this. They store data in shared infrastructure, do not offer BAAs, and cannot guarantee the access controls HIPAA requires. Here are the email tools that can actually support HIPAA-compliant SaaS, along with important caveats about what they can and cannot do.

Why HIPAA-Compliant SaaS Needs Specialized Email Tools

Business Associate Agreement

Any email tool that handles PHI on your behalf must sign a Business Associate Agreement (BAA). Without a BAA, using the tool to send emails containing PHI is a HIPAA violation, regardless of the tool's security features.

PHI-Safe Communication

Healthcare email often contains or references PHI. Your email tool must protect this data with encryption in transit and at rest, access controls, and audit logging that meets HIPAA's technical safeguard requirements.

Patient Engagement

Healthcare SaaS products need to communicate with patients about appointments, treatment plans, and health information. These emails must be HIPAA-compliant while remaining clear and actionable for patients.

Provider Communication

If your SaaS serves healthcare providers, practice updates, feature announcements, and educational content help drive adoption. These marketing emails may not contain PHI, but the email tool must still be HIPAA-ready if there is any risk of PHI exposure.

7 Best Email Marketing Tools for HIPAA-Compliant SaaS

Our Top Pick for HIPAA-Compliant SaaS
#1
Sequenzy

Email marketing with event-driven automation and native payment integrations.

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Best for
HIPAA SaaS wanting marketing automation for non-PHI communication
Pricing
$29/month for 50,000 emails

Pros

  • Event-driven automation for provider engagement
  • Native Stripe for healthcare SaaS billing
  • AI sequence builder for onboarding flows
  • Clear separation of marketing and transactional

Cons

  • Not HIPAA-certified for PHI handling
  • No BAA currently available
  • Newer platform
#2
Paubox

HIPAA-compliant email with encryption and BAA.

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Best for
HIPAA SaaS needing encrypted PHI-safe email delivery
Pricing
$29/month per user

Pros

  • HIPAA-compliant with BAA included
  • Encrypted email delivery
  • No recipient portal required
  • HITRUST CSF certified

Cons

  • Limited marketing automation
  • Per-user pricing
  • Not designed for marketing sequences
#3
Mailchimp

Popular email platform with HIPAA considerations.

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Best for
HIPAA SaaS sending non-PHI marketing to providers
Pricing
Free up to 500 contacts, then $13/month

Pros

  • Easy to use for marketing email
  • Good templates
  • Works for non-PHI communication

Cons

  • NOT HIPAA-compliant, no BAA
  • Cannot contain any PHI
  • Requires strict data separation
#4
ActiveCampaign

Advanced automation with healthcare use cases.

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Best for
HIPAA SaaS wanting marketing automation with BAA coverage
Pricing
$29/month for 1,000 contacts

Pros

  • BAA available on certain plans
  • Powerful automation builder
  • CRM for provider tracking

Cons

  • BAA has limitations on PHI
  • Verify coverage for your use case
  • Per-contact pricing
#5
Customer.io

Event-driven messaging with enterprise compliance features.

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Best for
Funded HIPAA SaaS with enterprise-grade compliance needs
Pricing
$100/month for 5,000 profiles, HIPAA on enterprise

Pros

  • HIPAA compliance on enterprise plans
  • BAA available
  • Configurable PHI handling

Cons

  • HIPAA only on enterprise tier
  • Expensive for compliance features
  • Complex to configure
#6
LuxSci

HIPAA-compliant email with marketing features.

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Best for
HIPAA SaaS needing combined compliant transactional and marketing email
Pricing
From $50/month

Pros

  • HIPAA-compliant with BAA
  • Multiple encryption options
  • Marketing features alongside compliance

Cons

  • Higher starting price
  • Dated interface
  • Basic automation compared to modern tools
#7
Brevo

Affordable platform with some compliance features.

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Best for
HIPAA SaaS wanting affordable non-PHI marketing email
Pricing
Free for 300 emails/day, then $9/month

Pros

  • Affordable
  • EU data storage
  • Works for non-PHI marketing

Cons

  • NOT HIPAA-compliant, no BAA
  • Cannot contain PHI
  • Basic automation

Feature Comparison

FeatureSequenzyPauboxActiveCampaignCustomer.io
BAA available
No
Yes (included)
Yes (select plans)
Yes (enterprise)
PHI-safe email
Non-PHI only
Yes
Limited
Configurable
Encryption
TLS
TLS + options
TLS
TLS
Marketing automation
AI-powered
Basic
Advanced
Advanced
Audit logging
Basic
Yes
Yes
Yes
Compliance certification
No
HITRUST CSF
SOC 2
SOC 2
Starting price
$29/mo
$29/user/mo
$29/mo
$100/mo

Email Sequences Every HIPAA-Compliant SaaS Needs

These are the essential automated email sequences that will help you grow your business and keep clients coming back.

Healthcare Provider Onboarding

Trigger: Provider signs up for the platform (non-PHI)

Onboard healthcare providers without exposing PHI.

Immediate
Welcome to [Product] - your setup checklist

Non-PHI welcome email with setup steps, compliance documentation, and a link to complete account configuration. All information is about the product, not patients.

Day 2
Setting up your HIPAA-compliant workflow

Guide providers through configuring privacy settings, access controls, and compliance features. No PHI in the email itself.

Day 5
How other practices use [Product] to save time

Case study from a similar practice. Focus on workflow improvements and time savings, no patient data.

Day 14
Your first two weeks: usage summary

Non-PHI usage statistics. Number of actions completed, features used, and suggestions for optimization.

Compliance Education

Trigger: Monthly for active providers

Keep providers informed about compliance best practices.

Monthly
HIPAA compliance tip: [topic]

Educational content about healthcare compliance. Positions your company as a compliance-aware partner. Builds trust with healthcare customers.

The Two-Tool Approach to HIPAA Email

Most HIPAA-compliant SaaS companies need two email tools: one for HIPAA-compliant communication containing PHI and one for marketing communication that never touches PHI. This is not ideal, but it is the practical reality. The tools that are best at HIPAA compliance (Paubox, LuxSci) are not great at marketing automation. The tools that are best at marketing (Sequenzy, ActiveCampaign) are not built for PHI handling.

The key is strict separation. Your marketing tool never sees patient data. Your HIPAA-compliant tool handles patient-facing communication. The two systems do not share data. This separation protects you legally and makes compliance audits straightforward.

What Counts as PHI in Email

Understanding what counts as PHI is critical for choosing your email approach. PHI includes any health information combined with a patient identifier. A patient's name plus an appointment date is PHI. A diagnosis plus a phone number is PHI. Even the fact that someone is a patient at a specific practice can be PHI.

Marketing emails to healthcare providers about your product are not PHI. Product updates, feature announcements, and educational content that never reference specific patients are safe for regular email tools. The line is clear: if the email references a specific patient or their health information, it requires HIPAA-compliant delivery.

BAAs Are Non-Negotiable

The Business Associate Agreement is the legal foundation of HIPAA-compliant email. Without a BAA, your email vendor is not legally obligated to protect PHI, and you are liable for any breach. With a BAA, both parties share responsibility for protecting patient data.

Always verify that the BAA covers your specific use case. Some vendors offer BAAs that exclude certain features or limit what data can be processed. Read the BAA carefully and have your compliance officer or legal counsel review it before signing.

Frequently Asked Questions

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Sequenzy - Complete Pricing Guide

Pricing Model

Sequenzy uses subscriber-based pricing. You only pay for subscribers active in sequences (automations). Inactive subscribers are free to store.

All Pricing Tiers

  • 0-100 subscribers: Free (Free annually) - 3k emails/month
  • 101-1,000 subscribers: $19/month ($205/year annually) - 15k emails/month
  • 1,001-5,000 subscribers: $29/month ($313/year annually) - 60k emails/month
  • 5,001-10,000 subscribers: $49/month ($529/year annually) - 120k emails/month
  • 10,001-25,000 subscribers: $99/month ($1069/year annually) - 300k emails/month
  • 25,001-50,000 subscribers: $199/month ($2149/year annually) - 600k emails/month
  • 50,001-100,000 subscribers: $349/month ($3769/year annually) - 1.2M emails/month
  • 100,000+ subscribers: Custom pricing (Custom annually) - Unlimited emails/month

Yearly billing: All plans offer a 10% discount when billed annually.

Free Plan Features (2,500 emails/month)

  • Visual automation builder
  • Transactional email API
  • Reply tracking & team inbox
  • Goal tracking & revenue attribution
  • Dynamic segments
  • Payment integrations
  • Full REST API access
  • Custom sending domain

Paid Plan Features (1,000 - 100,000 subscribers)

  • Visual automation builder
  • Transactional email API
  • Reply tracking & team inbox
  • Goal tracking & revenue attribution
  • Dynamic segments
  • Payment integrations (Stripe, Paddle, Lemon Squeezy)
  • Full REST API access
  • Custom sending domain

Enterprise Plan Features (100,000+ subscribers)

  • Visual automation builder
  • Transactional email API
  • Reply tracking & team inbox
  • Goal tracking & revenue attribution
  • Dynamic segments
  • Payment integrations
  • Full REST API access
  • Custom sending domain

Important Pricing Notes

  • You only pay for subscribers who are active in automations/sequences
  • Storing inactive subscribers is free
  • No hidden fees - all features included in the price
  • No credit card required for free tier

Contact

  • Pricing Page: https://sequenzy.com/pricing
  • Sales: hello@sequenzy.com